PAT: Protein Analysis Toolkit

VERIFY3D
Description	Structure evaluation based on local statistical potentials
URL	http://www.doe-mbi.ucla.edu/Services/Verify_3D
Information	If the input protein sequences are not aligned, they will be aligned using CLUSTALW. If only one PDB identifier or PDB structure chain is provided as input, the protein sequence will be self-evaluated against its own 3D structure.

Input
Type your input query in the box below: (Each sequence from the input text area is evaluated relatively to either the first structure chain found in the PDB file provided in the upload field or, by default, relatively to the first protein from the text area below whose name is a PDB chain identifier (eg., 1reiA, 2rhe or 4cpa_)) (Click here to get an input example) or upload your input query from a file : or use previous input/output compatible with VERIFY3D:

Input

Type your input query in the box below:
(Each sequence from the input text area is evaluated relatively to either the first structure chain found in the PDB file provided in the upload field or, by default, relatively to the first protein from the text area below whose name is a PDB chain identifier (eg., 1reiA, 2rhe or 4cpa_))
(Click here to get an input example)

or upload your input query from a file :

or use previous input/output compatible with VERIFY3D:

Parallel processing
You may select similar tools below if you want to launch them in parallel on the same input: EVAL23D EVDTREE ERRAT STRIDE

Output redirection
You may redirect the VERIFY3D output to one selected tool: