PAT: Protein Analysis Toolkit

CONSENSUS
Description	Consensus sequence builder
Information	CONSENSUS builds a sequence consisting of the most frequent amino acid observed at each position of the input multiple sequence alignment. If the alignment includes multiple secondary structure predictions, transmembrane segment predictions or structural evaluations, their consensus are also added to the alignment. The consensus of numeric scores will correspond to their average value. Note that input protein sequences will be aligned using CLUSTALW if needed.

CONSENSUS

Description

Consensus sequence builder

Information

CONSENSUS builds a sequence consisting of the most frequent amino acid observed at each position of the input multiple sequence alignment. If the alignment includes multiple secondary structure predictions, transmembrane segment predictions or structural evaluations, their consensus are also added to the alignment. The consensus of numeric scores will correspond to their average value. Note that input protein sequences will be aligned using CLUSTALW if needed.

Input
Type your input query in the box below: (Input should correspond to one or more protein sequences) (Click here to get an input example) or upload your input query from a file : or use previous input/output compatible with CONSENSUS:

Input

Type your input query in the box below:
(Input should correspond to one or more protein sequences)
(Click here to get an input example)

or upload your input query from a file :

or use previous input/output compatible with CONSENSUS:

CONSENSUS options
Uppercase for positions more conserved than this percentage		Lowercase for positions more conserved than this percentage

Output redirection
You may redirect the CONSENSUS output to one selected tool: