Protein
  Analysis
  Toolkit

WUBLAST2
Description Fast sequence similarity search
URL http://blast.wustl.edu/
Help http://blast.wustl.edu/blast/README.html

Input
Type your input query in the box below:
(Input should correspond to one protein sequence)
(Click here to get an input example)

or upload your input query from a file :

or use previous input/output compatible with WUBLAST2:

WUBLAST2 options
Sequence database Substitution matrix
Expectation threshold Low-complexity filter
Hit score threshold Max number of sequences
Gap opening penalty Max number of alignments
Gap extending penalty Additional options

Output redirection
You may redirect the WUBLAST2 output to one selected tool: